Arsip:

Uncategorized

Susanti Mugi Lestari, S.P., M.Si., Ph.D.

Uncategorized Minggu, 5 Februari 2023

Susanti Mugi Lestari, S.P., M.Si., Ph.D.
Bidang Keahlian : Mikrobiologi Tanaman
Pendidikan Terakhir : S3 (Kyungpook National University, South Korea)
Gol/Jabatan Terakhir : IIIc/Tenaga Pengajar
Status : Dosen Tetap

Publikasi Ilmiah:

  • Lestari, S. M., E. Nurhayati. 2014. Efisiensi tular benih squash mozaic virus pada Curcubiteae. Jurnal Fitopatologi Indonesia 10(3) : 81-86
  • Purba, E. R., S. M. Lestari, Y. Nurhaelena, D. Sri, S. Hidayat. 2017. Squash mozaic virus detection on five cucumber (Cucumis sativus L.) varieties. Indonesian Journal of Horticulture 8(2) : 104-110
  • Lestari, S. M., S. Hidayat, W. Widodo. 2018. Determination of endophytic fungi as induce resistance agent of chilli pepper against pepper yellow leaf curl disease. Agrivita 40(2) : 249-256
  • Pauzi. Y. S., S. M. Lestari, S. H. Hidayat. 2018. Variations of garlic common latent virus and shallot latent virus concentration on shallot and garlic. IOP Conference Series Earth and Environmental Science 197 (1) : 012045
  • Lestari, S. M., S. H. Hidayat. 2020.  Survey and detection of Banana bunchy top virus in Java. IOP Conference Series Earth and Environmental Science 583 : 012022
  • Lestari, S. M., P. Hidayat, S. Hidayat, J. K. Shim, K. Y. Lee. 2021. Bemisia tabaci in Java, Indonesia: genetic diversity and the relationship with secondary endosymbiotic bacteria. Symbiosis 83(6) : 317-333
  • Lestari, S. M., S. H. Hidayat, P. Hidayat, E. J. Kil, S. Lee, S. M. Kim, K. Y. Lee. 2023. Identification of begomoviruses associated with the insect vector Bemisia tabaci and various host plants on Java Island, Indonesia. Archives of Insect Biochemistry and Physiology 112(2) : e21984
  • Lestari, S.M., F. Khatun, R. Acharya, S. R. Sharma, y. k. Shrestha, M. M. H. Khan, T. Aye, O. M. Lynn, N. K. K. Win, T. X. Hoat, H. T. Dao, C. Tsai, J. Lee, H. S. Hwang, E. J. Kil, S. Lee, S. M. Kim, K. Y. Lee. 2023. Genetic diversity of cryptic species of Bemisia tabaci in Asia. Archives of Insect Biochemistry and Physiology 112(3) : e21981
    • read more

    Agung Dian Kharisma, S.Pd.Si., M.Biotech., Ph.D.

    Uncategorized Minggu, 5 Februari 2023

    Agung Dian Kharisma, S.Pd.Si., M.Biotech., Ph.D.
    Bidang Keahlian : Mikrobiologi
    Pendidikan Terakhir : S3 ( Tokyo University of Agriculture and Technology, Japan)
    Gol/Jabatan Terakhir : IIIc/ Tenaga Pengajar
    Status : Dosen Tetap

    Publikasi Ilmiah:

  • Fardhani, D. M., Y. Ohta, N. A. Arrofatullah, A. D. Kharisma, J. Satitmunnaithum, S. Tanabata, I. Ogiwara, A. Widyastuti, and T. Sato. 2021. Hot water spray over strawberry plants effectively controls the occurrence of strawberry powdery mildew in everbearing strawberry production. Japanese Journal of Farm Work Research 56 (1) : 29-38.
  • Kumalasari., Y.I., A. D. Kharisma, and S. Yuwantiningsih. 2021. Potetial of Karimunjawa Island’s plants as antibiotic-producing endophytic bacteria sources. Advances in Science and Technology 112 : 97-104
  • Widiastuti, A., N. A. Arofatullah., A. D. Kharisma, T. Sato. 2021. Upregulation of heat shock transcription factors, Hsp70, and defense-related genes in heat shock-induced resistance against powdery mildew in cucumber. Physiological and Molecular Plant Pathology 116 : 101730
  • Kharisma, A. D., Y Amekan., S. Sarto, M. Cahyanto. 2021. Effect of hydrogen peroxide on biohydrogen production from melon fruit (Cucumis melo L.) waste by anaerobic digestion microbial community. International Journal of Renewable Energy Research 11(1) : 95-101
  • Kharisma, A.D., N. A. Arofatullah, K. Yamane, S. Tanabata, and T, Sato. 2021. Regulation of defense responses via heat shock transcription factors in Cucumis sativus L. against Botrytis cinerea. Journal of General Plant Pathology 88 : 17-28
  • Satitmunnaithum, J., H. Kitazawa, N.A. Arofatullah, A. Widyastuti, A. D. Kharisma, K. Yamane, S. Tanabata, T. Sato. 2022. Microbial population size and strawberry fruit firmness after drop shock-induced mechanical damage. Postharvest Biology and Technology 192 : 112008
  • Mindrati, D., A. D. Kharisma, T. Kobayashi, N. A. Arofatullah, M. Yamada, S. Tanabata, Y. Yokoda, A. Widiastuti, T. Sato. 2022. Ultraviolet-B irradiation induces resistance against powdery mildew in cucumber (Cucumis sativus L.) through a different mechanism than that of heat shock-induced resistance. Agronomy 12(12) : 3011.
  • Rui, L., R. Atarashi, A. D. Kharisma, J. Satitmunnaithum, S. Tanabata, and T. Sato. 2023. Causes of Postharvest Deformation “Blossom-End Enlargement” in Cucumber. American Society for Horticultural Science.
  • Rui, L., R. Atarashi, A. D. Kharisma, N. A. Arofatullah, Y. Tashiro, J. Satitmunnaithum, S. Tanabata, K. Yamane, and T. Sato. Search for Expression Marker Genes That Reflect the Physiological Conditions of Blossom End Enlargement Occurrence in Cucumber. International Journal of Molecular Sciences 25(15): 8317.
    • read more

    Muhammad Saifur Rohman, S.P., M.Si., M. Eng., Ph.D.

    Uncategorized Senin, 31 Mei 2021

    Muhammad Saifur Rohman, S.P., M.Si., M. Eng., Ph.D.
       Bidang Keahlian    :   Mikrobiologi Agroindustri
       Pendidikan Terakhir    :   S3 (Osaka University, Japan)
       Pangkat/Gol/Jabatan Akademik    :   III d/Lektor Kepala
       Status    :   Dosen Tetap

    Publikasi:

  • Rohman, M.S., Koga, Y., Takano, K., Chon, H., Crouch, R.J. and Kanaya, S. (2008) Effect of the disease-causing mutations identified in human ribonuclease (RNase) H2 on the activities and stabilities of yeast RNase H2 and archaeal RNase HII. FEBS J, 275:48
  • Tadokoro, T., Matsushita, K., Abe, Y., Rohman, M.S., Koga, Y., Takano, K. and Kanaya, S. (2008) Remarkable stabilization of a psychrophilic RNase HI by a combination of thermostabilizing mutations identified by the suppressor mutation method. Biochemistry, 47:8040-8047.
  • Rohman, M.S., Tadokoro, T., Angkawidjaja, C., Abe, Y., Matsumura, H., Koga, Y., Takano, K. and Kanaya, S. (2009) Destabilization of psychrotrophic RNase HI in a localized fashion as revealed by mutational and X-ray crystallographic analyses. FEBS J, 27:603-613.
  • Rohman, M.S., Prijambada, I.D., Indriani, Y.A., Hendrosatriyo, H. 2012. Identification of protease producing halophilic bacteria from Bledug Kuwu-mud volacano. I.J.Biotechnol. 17(1):35-41
  • Joko, T. Koentjoro, M.P., Somowiyarjo, S., Rohman, M.S., Liana, A., Ogawa, N. 2012. Response of rhizobacterial communities in watermelon to infection with cucumber green mottle mosaic virus as rrevealed by cultivation-dependent RISA Arch. Phytopathol. Plant Protect. 45 (15): 1810-1818.
  • Rohman, M.S., E Pamulatsih, Y Kusnadi, T Yuwono, E Martani. 2015. An Active Of Extracellular Cellulose Degrading Enzyme From Termite Bacterial Endosimbiont. Indonesian Journal of Biotechnology 20 (1), 62-68
  • M.S. Rohman. 2016. Biochemical properties of crude extracellular proteases from Chromohalobacter salexigens BKL5 and Micrococcus luteus 11A. Indonesia Journal of Biotech. 21 (1) : 56-62.
  • Fitriani, D., M.S. Rohman, and ID Prijambada. 2017. Proteolytic Activity Of Recombinant Degp From Chromohalobacter Salexigens BKL5. Electronic Journal of Biotechnology 29, 7-12.
  • R Simarmata, N Ngadiman, M S Rohman, P Simanjuntak. 2018. Amelioration of salt tolerance in soybean (Glycine Max. L) by plant-growth promoting endophytic bacteria produce 1-aminocyclopropane-1-carboxylase deaminase. Annales Bogorienses 22(2): 81-93.
  • D Utami, D Widianto, M S Rohman, H H Satriyo, A J Sheila. 2019. Synergistic Capability of Bacterial-fungal Co-culture to Degrade Drill Cutting Hydrocarbon. Journal of Microbial & Biochemical Technology 11(5): 1-7.
  • R Simarmata, N Ngadiman, M S Rohman, P Simanjuntak. 2019. Identification of 1-Aminocyclopropane-1-Carboxilid Acid (ACC)-Deaminase Producing Endophytic Bacteria from Local Agricultural Plantation Based on 16S Ribosomal RNA Gene as Genetic Marker. BIOTROPIC The Journal of Tropical Biology 3(1): 13-23.
  • R Simarmata, U Salamah, M S Rohman, P Simanjuntak. 2019. Ecological and physiological characterization of ACC deaminase-producing bacteria isolated from specific sites in Yogyakarta, Indonesia. IOP Conference Series: Earth and Environmental Science 308: 1-13.
  • T Joko, A Soffan, M S Rohman. 2019. A novel subspecies-specific primer targeting the gyrase B gene for the detection of Pectobacterium carotovorum subsp. brasiliense. Biodiversitas Journal of Biological Diversity 20(10): 3042-3048.
  • D W Respatie, M S Rohman, D Widianto, J Widada. 2020. Pengaruh Kombinasi Pupuk Anorganik dan Vinase Diperkaya Mikrobia terhadap Pertumbuhan dan Hasil Jagung (Zea mays L.). Vegetalika 9(4): 547-561.
  • L Pradani, M S Rohman, S Margino. 2020. The structural insight of class III of polyhydroxyalkanoate synthase from Bacillus sp. PSA10 as revealed by in silico analysis. Indonesian Journal of Biotechnology 25(1): 33-42.
  • N I Kurniah, W D Sawitri, M S Rohman, Y Nugraha, T Hase, B Sugiharto. 2021. Mutation of UDP-glucose binding motif residues lead to increased affinity for ADP-glucose in sugarcane sucrose phosphate synthase. Molecular Biology Reports 48: 1697-1706.
  • R Simarmata, M S Rohman. 2021. Bacterial Coating on Seeds as a Potential Application of Bio-inoculants. 10th International Seminar and 12th Congress of Indonesian Society for Microbiology (ISISM 2019). 181-188
  • A Sheila, S Siti, R M Saifur, O Naoto, J Tri. 2022. Manuka honey reduces the virulence of Pectobacterium brasiliense by suppressing genes that encode plant cell wall-degrading enzymes. ASEAN Journal on Science and Technology for Development 39(3): 119-124.
  • L D Witasari, J Halim, C Jilbert, M S Rohman. 2022. Amplification of Thermostable Neutral Protease Open Reading Frame from Geobacillus sp. DS3 Isolated from Sikidang Crater, Dieng Plateau, Central Java, Indonesia. International Conference on Sustainable Environment, Agriculture and Tourism (ICOSEAT 2022). 770-777
  • R A Putri, M S Rohman, R T Swasono, T J Raharjo. 2023. A novel synthetic peptide analog enhanced antibacterial activity of the frog-derived skin peptide wuchuanin-A1. Journal of Biomolecular Structure and Dynamics 1-11.
  • H Arai, M Ueda, T Hirano, N Akizuki, S R Lin, D K Hanh, J Widada, M S Rohman, M Nakai, Y Kunimi, L V Vang, A Wijonarko. 2023. Conserved infections and reproductive phenotypes of Wolbachia symbionts in Asian tortrix moths. Environmental MIcrobiology Reports 1-10.
  • R Simarmata, I C Nisa, A Rachmat, M S Rohman. 2023. Endophytic bacteria from paddy with double 1-aminocyclopropane-1-carboxylic acid deaminase and nitrogenase activity. Emirates Journal of Food and Agriculture 35(11): 1-10.
  • Sudarmanto, I., M. S. Rohman, and W. T. Artama. 2024. Effect of the D185 mutation on the stability and functionality of rubisco like protein (RLP) from chromohalobacter salexigen BKL 5. Journal of Chemistry 18(1): 1-7.
  • Sudarmanto, I., L. L. Sitohang, M. S. Rohman, and W. T. Artama. 2024. Cloning and expression of rubisco like protein (RLP) from halophilic bacterium chromohalobacter salexigens BKL 5. Biodiversitas 25(4): 1605-1614.
  • Sudarmanto, I., W. T. Artama, and M. S. Rohman. 2024. Physicochemical characterization and comparative analysis of ribulose 1,5 biphosphate carboxylase-oxygenase like proteins (RLP) from halophilic chromohalobacter salexigens BKL. Journal of Scientific and Applied Chemistry 27(4): 151-159.
  • Kurniawan, D. S., M. S. Rohman, and L. D. Witasari. 2024. Heterologous expression, characterization, and application of recombinant thermostable a-amylase from Geobacillus sp. DS3 for porous starch production. Biochemistry and Biophysic Reports 39: 1-10.
    • read more

    Ir. Jaka Widada, M.P., Ph.D.

    Uncategorized Senin, 31 Mei 2021

    Ir. Jaka Widada, M.P., Ph.D.
    Bidang Keahlian : Mikrobiologi Terapan
    Pendidikan Terakhir : S3 (The University of Tokyo, Japan)
    Pangkat/Gol/Jabatan Akademik : IVa/ Lektor Kepala
    Status : Dosen Tetap

    Publikasi Ilmiah:

    Kabirun, S. and J. Widada. Response of soybean grown on acid soils to inoculation of vesicular-arbuscular mycorrhizal fungi. Biotrop Spec. Publ. 56, 131-137. 1995. Ngadiman, Widada J.; and Hartadi S. 1997. Budidaya Azolla pada lahan gambut: Pengaruh pengapuran dan pemupukan P pada pertumbuhan and penambatan N Azolla. J. Ilmu Tanah dan Lingkungan 1: 55-60 Suhardi, M. Naim, B. Radjagukguk, O. Karyanto, J. Widada, W.W. Winarni, T. Herawan. Interaction of progenies/provenances of sengon (Paraserianthes falcataria), arbuscular mycorrhizal fungi and rhizobial isolates grown on a Ultisol. In: Dela Cruz, R.E., Ishii K., Follosco, M., Suzuli, K. Challenges for Biotechnology in the Next Millennium. 3 Nov 1998. Nojiri H., J. Widada, H. Hirano, K. Ide, M. Yotsumoto, T. Yoshida, H. Habe and T. Omori. Monitoring Pseudomonas sp. strain CA10 in bioremediation of dioxin-contaminated soil. 3 Sep 2000. Nojiri H., J. Widada , K. Kasuga, T. Yoshida, H. Habe and T. Omori. Rapid, sensitive, acurate monitoring method for augmented dioxin degrading bacteria. 51-58. 2001. Habe H, Ide K, Yotsumoto M, Tsuji H, Hirano H, Widada J, Yoshida T, Nojiri H, Omori T. Preliminary examinations for applying a carbazole-degrader, Pseudomonas sp. strain CA10, to dioxin-contaminated soil remediation. Applied Microbiology and Biotechnology. 56(5-6), 788-795. 2001. Widada J, H. Nojiri, K. Kasuga, T. Yoshida, H. Habe, T. Omori. Quantification of the carbazole 1,9a-dioxygenase gene by real-time competitive PCR combined with co-extraction of internal standards. FEMS Microbiology Letters. 202(1), 51-57. August 2001. Widada J., H. Nojiri, T. Yoshida, H. Habe, and T. Omori. Molecular characterization of bacterial consortia capable of degrading branched nonylphenol. 2002. Widada J., H. Nojiri, K. Kasuga, T. Yoshida, H. Habe and T. Omori. Molecular detection and diversity of polycyclic aromatic hydrocarbon-degrading bacteria isolated from geographically diverse sites. Applied Microbiology and Biotechnology. 58(2), 202-209. 2002. Widada J., H. Nojiri, S. Nakai, K. Inoue, M. Shintani, T. Yoshida, H. Habe, and T. Omori. Molecular diversity of carbazole-utilizing bacteria and their catabolic genes. 2002. Widada, J., Damarjaya, D.I., Kabirun, S. The interactive effects of arbuscular mycorrhizal fungi and rhizobacteria on the growth and nutrients uptake of sorghum in acid soil. 15 Sep 2002. Widada J, H. Nojiri, and T. Omori. Recent developments in molecular techniques for identification and monitoring of xenobiotics-degrading bacteria and their catabolic genes in bioremediation. Applied Microbiology and Biotechnology. 60(1-2), 45-59. October 2002. Widada J, H. Nojiri, T. Yoshida, H. Habe and T. Omori. Enhanched degradation of carbazole and 2,3-dichlorodibenzo-p-dioxin in soils by Pseudomonas resinovoran strain CA10. Chemosphere. 49(5), 485-491. November 2002. Inoue,K., Widada, J., Nakai,S., Endoh,T., Urata,M., Ashikawa,Y., Shintani,M., Saiki,Y., Yoshida,T., Habe,H., Omori,T. and Nojiri,H. Divergent Structures of Carbazole Degradative car Operons Isolated from Gram-negative Bacteria. Biosci. Biotechnol. Biochem. 68, 1467. 1 Jul 2004. Noumura T, Habe H, Widada J, Chung JS, Yoshida T, Nojiri H, Omori T.. Genetic characterization of the dibenzofuran-degrading Actinobacteria carrying the dbfA1A2 gene homologues isolated from activated sludge. FEMS Microbiol Lett.. 239(1), 147-155. 1 October 2004. Widada, J., Nojiri, H., Kasuga, K., Yoshida, T., Habe, H., and Omori, T. 2001. Quantification of carbazole 1,9a-dioxygenase gene by real-time competitive PCR combined co-extraction of internal standards. FEMS Microbiol. Lett. 202: 51 – 57. Sri Wedhastri & J.Widada.2000. Penggunaan Rhizobakteria dalam Produksi Inokulum Jamur Mikorisa Arbuskular. Jurnal Ilmu Tanah dan Lingkungan 2 (2):13-20 K. Inoue, J Widada, T Omori and H. Nojiri (2005) Molecular Techniques of Xenobiotic-Degrading Bacteria and Their Catabolic Genes in Bioremediation, Bioremediation of Aquatic and Terrestrial Ecosystems, Enfiel (NH), USA, Science Publishers, 1-30 pages (bookchapter). Prijambada, I.D., Widada, J. and Ngadiman. 2006. Evaluation of Boehmeria nivea and Morus alba as bioindicators for cadmium and chromium contamination in soil. Proceeding of the 6th International Symposium on Advanced Environmental Monitoring, Jerman. Ngadiman, Prijambada, I.D., Widianto, D., Widada, J., Widiastuti, E.T., Safarida, A., Ramdani, D., Kurniasari, I. 2005. Rhizofiltration of Heavy Metals in Aquaeous Waste Using Aquatic Plants. Proceeding of The 3rd International Seminar on Environment and ustainable Development. International Environmental Research Center-Gwangju Institute of Science an Technology. Korea. Irfan D. Prijambada, Jaka Widada, and Roswinda A. Sitompul. 2006. Impact of Land Use Intensity on Microbial Community in Agroecosystems of Southern Sumatera. Proceeding of International Symposium on Food and Environmental Preservation in Asian Agriculture, Yogyakarta, Indonesia, November 22-23, 2005. In Press. Irfan D. Prijambada, Ngadiman, Donny Widianto, and Jaka Widada. 2006. Evaluation of Boehmeria nivea and Morus alba as bioindicators for cadmium and chromium contamination in soil. Proceeding of the 6th International Symposium on Advanced Environmental Monitoring, Heidelberg, Germany, June 27-30, 2006. In Press. Widada, J. 2009. Molecular characterization of bacterial consortia capable of degrading bacteria. FEMS Micobiol Letter. Wiley International . Widada, J. 2009. Novel marine carbazole-degrading bacteria. FEMS Micobiol Letter. Wiley International Publisher. Mujiyo, Mujiyo; Sunarminto, Bambang Hendro; Hanudin, Eko; Widada, Jaka; Syamsiyah, Jauhari. 2017. Methane production potential of soil profile in organic paddy field. Soil and Water Research. 12(4). Ethica, Stalis Norma; Semiarti, Endang; Widada, Jaka; Oedjijono, Oedjijono; Joko Raharjo, Tri. 2017. Characterization of moaC and a nontarget gene fragments of food‐borne pathogen Alcaligenes sp. JG3 using degenerate colony and arbitrary PCRs. Journal of food safety. 37(4). Herdini, Camelia; Mubarika, Sofia; Hariwiyanto, Bambang; Wijayanti, Nastiti; Hosoyama, Akira; Yamazoe, Atsushi; Nojiri, Hideaki; Widada, Jaka. 2017. Secondary bioactive metabolite gene clusters identification of anticandida-producing Streptomyces sp. GMR22 isolated from Wanagama forest as revealed by genome mining approach. Indonesian Journal of Pharmacy. 28(1). Melki, Melki; Isnansetyo, Alim; Murwantoko, Murwantoko; Widada, Jaka. 2018. Distribution of Ammonium-Oxidizing Bacteria in Sediment with Relation to Water Quality at the Musi River, Indonesia. Hayati Journal of Bioscience. 25(4). Amekan, Yumechris; Pudak Wangi, Dyah Sekar Ayu; Cahyanto, Muhammad Nur; Widada, Jaka. 2018. Effect of Different Inoculum Combination on Biohydrogen Production from Melon Fruit Waste. International Journal of Renewable Energy Development. 7(2). Melki, M., Isnansetyo, A., Murwantoko, M., & Widada, J. 2019. Seasonal Abundance and Community of Ammonia-Oxidizing Bacteria in the Musi River Sediment, South Sumatra, Indonesia (plagiarism). Journal of Environmental Science and Technology, 12(3), 108-116. Rahayu, E. S., Rusdan, I. H., Athennia, A., Kamil, R. Z., Pramesi, P. C., Marsono, Y., & Widada, J. 2019. Safety Assessment of Indigenous Probiotic Strain Lactobacillus plantarum Dad-13 Isolated from Dadih Using Sprague Dawley Rats as a Model. Am J Pharmacol Toxicol, 1, 38-47. Evizal, Rusdi; Tohari, Tohari; Prijambada, Irfan Dwija; Widada, Jaka. 2020. Peranan pohon pelindung dalam menentukan produktivitas kopi. Jurnal agrotropika. Herlambang, S., Maas, A., Utami, S. N. H., & Widada, J. 2019. The Dynamics of C and N by Combination of Composted Fresh Organic Waste as Soil Amendment in the Soil Thickness at Pineapple Plantation, Lampung Indonesia. Jauhari, S., Sunarminto, B. H., Eko, H., & Jaka, W. 2019. Carbon dioxide emission and carbon sequestration potential in Alfisol. Bulgarian Journal of Agricultural Science, 25(1), 42-48. Banin, M. M., Utami, T., Cahyanto, M. N., Widada, J., & Rahayu, E. S. (2019). Effects of Consumption of Probiotic Powder Containing Lactobacillus Plantarum Dad-13 on Fecal Bacterial Population in School-Age Children in Indonesia. International Journal of Probiotics & Prebiotics, 14(1). Prihatiningsih, Nur; Arwiyanto, Triwidodo; Hadisutrisno, Bambang; Widada, Jaka. 2020. Characterization of Bacillus spp. from the rhizosphere of potato Granola varieties as an antibacterial against Ralstonia solanacearum. Biodiversitas Journal of Biological Diversity. 21(9) Tambunan, Tarsa Ruli; Widada, Jaka; Damayanti, Ema; Wahyuningsih, Tutik Dwi. 2020. Antiplasmodial Activity of the Low Molecular Weight Compounds from Streptomyces sp. GMR22. Indonesian Journal of Pharmacy. Sukmana, Siswandana Putra; Putra, Eka Tarwaca Susila; Jaka, Widada. 2020. Bioassay Guided Fractionation of Marine Streptomyces sp. GMY01 and Antiplasmodial Assay using Microscopic and Flow Cytometry Method. Indonesian Journal of Pharmacy. Sukmana, Siswandana Putra; Putra, Eka Tarwaca Susila; Jaka, Widada. 2020. The effects of types of manure and mycorrhizal applications on sandy soils on the growth and yield of curly red chili (Capsicum annum L.). Caraka Tani: Journal of Sustainable Agriculture. 35(2). 2020. Nopitasari, Sri; Setiawati, Yuli; Lawrie, Muhammad Dylan; Purwantoro, Aziz; Widada, Jaka; Sasongko, Aries Bagus; Yoshioka, Yasushi; Matsumoto, Shogo; Ninomiya, Kana; Asano, Yukii. 2020. Development of an agrobacterium-delivered CRISPR/Cas9 for Phalaenopsis amabilis (L.) Blume genome editing system. AIP Conference Proceedings. 2020. Setiawati, Yuli; Nopitasari, Sri; Lawrie, Muhammad Dylan; Purwantoro, Aziz; Widada, Jaka; Sasongko, Aries Bagus; Ninomiya, Kana; Asano, Yuuki; Matsumoto, Shogo; Yoshioka, Yasushi. 2020. Agrobacterium-mediated transformation facillitates the CRISPR/Cas9 genome editing system in Dendrobium macrophyllum A. Rich orchid. AIP Conference Proceedings. Prihatiningsih, N., Arwiyanto, T., Hadisutrisno, B., & Widada, J. 2020. Characterization of Bacillus spp. from the rhizosphere of potato Granola varieties as an antibacterial against Ralstonia solanacearum. Biodiversitas Journal of Biological Diversity, 21(9). Ariyanti, N. F., Widada, J., & Subandiyah, S. 2020. Hyper-solubilizing tricalcium phosphate mutants of Klebsiella sp. GMD08. BIOTROPIA-The Southeast Asian Journal of Tropical Biology, 27(3), 238-247. Ikhsani, A. Y., Riftyan, E., Marsono, Y., Utami, T., Widada, J., & Rahayu, E. S. 2016. Safety Evaluation of Lactobacillus plantarum Mut-7 as a Potential Indigenous Probiotic Strain Using Sprague Dawley Rats as a Model. Innovation of food technology to improve food security and health, 76. Damayanti, E., Widada, J., Lotulung, P. D. N., & Dinoto, A. 2020. Bioassay Guided Fractionation of Marine Streptomyces sp. GMY01 and Antiplasmodial Assay using Microscopic and Flow Cytometry Method. Indonesian Journal of Pharmacy. Arwiyanto, T., Nurcahyanti, S. D., Indradewa, D., & Widada, J. 2020. Antagonistic activity of bacterial rhizosphere from rootstocks of tomato and eggplant against Ralstonia solanacearum. ACTA HORTICULTURAE SULISTYANI, N., MURTI, Y. B., & WIDADA, J. 2021. ANTIBACTERIAL SUBSTANCE PRODUCED BY A SOIL BACTERIA ISOLATED FROM RHIZOSPHERE OF ZINGIBER OFFICINALE. International Journal of Applied Pharmaceutics, 62-66. Indarti, S., Widianto, D., Mulyadi, M., & Widada, J. 2020. Potato cyst nematode-infected soil as a source of egg and cyst parasitic fungi as potential biocontrol agents.

    Archives of Phytopathology and Plant Protection read more

    Prof. Ir. Sebastian Margino, Ph.D.

    Uncategorized Senin, 31 Mei 2021

    Bidang Keahlian : Bioteknologi Pertanian
    Pendidikan Terakhir : S3 (The University of Tokyo, Japan)
    Gol/Jabatan Terakhir : IVd/ Guru Besar
    Status : Dosen Tetap (retired)

    Publikasi Ilmiah:

  • Jesmandt Situmorang, Sebastian Margino, L. Sembiring, dan Siti Sumarmi. 1997. Sidik Cepat Isolat-Isolat Bakteri Patogenik Terhadap Spodoptera litura (Fab.), Helicoverpa armigera (Hub.) dan Plutella xylostella (L.). Jurnal Biologi, 2(3): 101-113.
  • Sebastian Margino. 1997. Pemanfaatan Umbi Sebagai Bahan Dasar Pemanis Kalori rendah Secara Mikrobiologi. Seminar Sehari Dies Natalis Fakultas Pertanian UGM. 25 September 1997.
  • Retno Setyowati, Retno Indrati, dan S. Margino. 1997. Optimalisasi produksi inulinase yeast hasil isolasi dari tanah sekitar umbi Dahlia. BPPS -UGM : 10 (4 B) 515-525.
  • Agus Santoso, E. S. Rahayu, D. Wibowo, dan S. Margino. 1997. Optimalisasi produksi antimikrobia oleh Lactobacillus sp. TGR-2. BPPS – UGM, 10 (1B): 133-145.
  • Tri Wardani, E.S. Rahayu, S.Sudar madji, dan S. Margino, 1997. Daya bunuh antimikrobia Lactobacillus sp. TGR-2 serta uji coba pada susu. BPPS – UGM, 10 (1B) : 147-165.
  • Sebastian Margino, Agus Wijaya, Endang S. Rahayu. 1998. Cloning of Lab Gene Encoding Bacteriocin from Pediococcus acidilactici F11 into Escherichia coli DH5? Agritech 18(3) : 8-11.
  • Sebastian Margino, Sri Winastuti, Endang S. Rahayu, 1998. Mutation Technique for Increasing the Production of Antibacteria Lactobacillus plantarum TGR-2. Indoneian Food and Nutrition Progress: 5(2):73-78.
  • Sebastian Margino, 1997. Pemanfaatan Umbi Sebagai Bahan Dasar Pemanis Kalori Rendah Secara Mikrobiologi. Seminar Sehari Dies Natalis Fak. Pertanian UGM. 25 – September 1997. Yogyakarta.
  • Sebastian Margino, Fungki Sri Rejeki, Endang S. Rahayu. 1998. Protoplast Fusion of Koji-Mold Aspergillus spp. To Improve Kecap Production. Indonesian Food and Nutrition Progress : 5 (1): 21-26.
  • Sebastian Margino, Retno Setyowati, Retno Indrati, dan Endang S. Rahayu. 1998. Studi Pendahuluan Inulinase Khamir Termotoleran dan Kemungkinan Pemanfaatannya sebagai Agensia Penghasil Gula Cair Rendah Kalori. Seminar Teknologi Pangan dan Gizi, Tanggal 15 Desem ber 1998, Yogyakarta.
  • Sebastian Margino. 1998. Bioteknologi dan Prospeknya Di Bidang Pendidikan dan Industri. Seminar Sehari “Peningkatan Guru Mata Pelajaran IPA-IPS SMU Se DIY,1Agustus1998, Sleman Yogyakarta
  • Sebastian Margino, Riyanto, dan A. Yuswanto. 1998. Transforamsi Gen Penyandi Produksi Poli-?-Hidroksi Asam Butirat (PHB) Bacillus sp. LPSB-19 Ke Dalam Escherichia coli JM 101 Dengan Teknik Polymerase Chain Reaction (PCR). Prosiding Seminar Nasional II Plastik dan Lingkungan. 30 Juni 1998. Yogyakarta.
  • Rahayu, E.S. Pertiwiningrum, A., R. Indriati, S. Raharjo, S. Margino. 1998. Transformasi fragmen DNA Salmonella ke dalam sel Escherichia coli DH5?. Agritech. 17(1): 1-5.
  • Erni Martani dan S. Margino. 1998. Decolorization of Pulp Mill Effluents by White Rot Fungi and Its Correlation to Lignin Degradation. Berkala Ilmiah Biologi. Vol 2(6):265-276.
  • Erni Martani dan Sebastian Margino. 1998. Prospek pengembangan Bahan Dasar Bioplastik Terdegradasi. Prosiding Seminar nasional II Plastik dan Lingkungan. 30 Juni 1998. Yogyakarta. P. 30-38.
  • Sebastian Margino, Wijanarko and F. Tomota. 1998. Isolation and Selection of Endophytic Fungus Xylan Degrader and Xylanase Purification. Proceeding Seminar on The Tokyo international forum on conservation and sustainable use of tropical bioresources. NEDO/ JBA. Tokyo, November 9-10 . 1998.
  • Sebastian Margino, L. Sembiring, Erni Martani, dan A. Yuswanto. 1999. Kloning dan Ekspresi Gen Penghasil Bahan Dasar “Biodegradable Thermoplastic”{ (Poli-?-Hidroksi Asam Butirat (PHB)} ke Dalam Bacillus sp. amilolitik. Seminar Pemaparan Ke IV Hasil Penelitian Hibah Bersaing Tahun 1999/2000 Tanggal 23-25 Nopember 1999. Jakarta.
  • Sebastian Margino. 1999. Teknik Mutasi Untuk Peningkatan Produksi Bahan Dasar Plastik Terdegradasi Poli-?-Hidroksi Asam Butirat. Berkala Ilmiah Biologi Vol. 2:
  • Sebastian Margino, Widodo, dan Soesanto. 2001. Konfirmasi dan Uji Hayati Fusan Bacillus thuringiensis var israelensis dengan Bacillus thuringiensis var kurstaki. Jurnal Kedokteran “YARSI” ( submitted).
  • Margino, S., D. Zul, dan Pudjono. 2000. Produksi dan Purifikasi Inulinase Ekstraseluler Isolat Indigenus Khamir Thermotoleran Kluyveromyces marxianus T-2. Prosiding Seminar Nasional Enzim dan Bioteknologi II. Jakarta, 15-16 Februari 2000.
  • Rahayu, E.S., S. Margino dan E. Harmayani. 2000. Produksi Bakteriosin oleh Leuconostoc mesenteroides SM 22 Menggunakan Tetes Sebagai Sumber Karbon. Prosiding Seminar Nasional Enzim dan Bioteknologi II. Jakarta, 15-16 Februari 2000.
  • Martani, E., B.H. Sunarminto, A. Supriyo, dan S. Margino. 2001. Herbisida Paraquat dalam Lahan Gambut: II. Pengaruhnya Terhadap Pertumbuhan dan Hasil Kedelai. J. Perlindungan Tanaman Indonesia (Indonesian Journal of Plant Protection). Vol. 7 (1):
  • Margino, S., Erni Martani and B.H. Sunarminto. 2000. Paraquat Herbicide in Peat Soil: I. Its Effects on the Dynamics of Microbial Population. J. Perlindungan Tanaman Indonesia (Indonesian Journal of Plant Protection). Vol. 6, No.
  • Erni Martani, B. Sunarminto, S. Margino dan S. Handayani.2000. Herbisida paraquat dalam lahan gambut: Pengaruhnya terhadap tanah dan per-tumbuhan jagung. J. Manusia dan Linkungan. Vol. 7 (2):35-44.
  • Sebastian Margino, Erni Martani, Soesanto, Yuswanto, A., dan L. Sembiring. 2000. Isolasi dan Seleksi Bakteri Penghasil Plastik Terdegradasi, Poli-?-Hidroksibutirat. J. Biologi, Vol. 2, (No. 10): 583-597.
  • Margino, S.. E.Marta ni dan E. Martono. 2001. Biodegradasi Karbofuran oleh Isolat Bakteri Tanah. Mediagama. Vol. III, No. 2. : 74-80.
  • Erni Martani, K. Wibowo, B.Rajagukguk dan S. Margino. Influences of paraquat on a soil bacteria, Rhizobium sp.
  • Sebastian Margino, F. Mubin, Irfan D.P. dan F. Tomita. 2001. Potensi Keragaman Hayati Fungi Endofit dari untuk Menghasilkan Senyawa Antifungi. Prosiding Seminar Keanekaragaman Hayati dan Aplikasi Bioteknologi Pertanian. Tanggal 6 Maret 2001. BPPT, Jakarta. pp. 437-450.
  • Erni Martani, B. Sunarminto, Agus Supriyo dan Sebastian Margino. 2001. Herbisida Parakuat Dalam Lahan Gambut : II. Pengaruhnya Terhadap Pertumbuhan dan Hasil Kedelai. Jurnal Perlindungan Tanaman Indonesia. Vol. 7. (No.1): 22-31.
  • Erni Martani, N. Arfa yanti, S. Margino dan.Sri Noegrohati. 2002. Study on paraquat degrading bacteria isolated from Indonesia soils. J. Perlind. Tanaman Indonesia. Vol. 8 (1): 35-43.
  • Erni Martani, BH Sunarminto, A. Supriyo dan S. Margino. 2002. Herbisida paraquat dalam lahan gambut: Pengaruhnya Terhadap Pertumbuhan dan Hasil Padi. J. Mediagama.
  • Erni Martani, S. Margino & R.Worang.2002. Antifungi Penghambat Fusarium oxysporum f.sp. cubense yang disintesis oleh fungi endofit. Gama Sains. Vol 4 (2): 112-120.
  • N.A. Yanti, Erni Martani & S. Margino. 2003. Isolasi bakteri pendegradasi paraquat dari Tanah Gambut. J. Gamasains
  • Erni Martani, S. Margino, & A. Budiawan. 2002. Isolation and Characterization of Eucaryotic Microorganisms Tolerant to Paraquat from Soils. J. Perlindungan Tanaman Indonesia(submitted).
  • Erni Martani, S. Margino, & M. Magdalena. 2004. Paraquat Toxicity on Root Nodule Formation of Macroptillium artropurpureum Urg. and its Correlation with Population of Rhizobium sp. J. perlindungan Tanaman Indonesia 10(2):87-96.
  • Fungal Diversity in Peat Soil from Pangkoh, Central Kalimantan, Jurnal Tanah Tropika, 2005
  • Biodegradation of Paraquat in Peat Soil by Micrococcus sp. S2 and Achromobacter sp. SM1, Jurnal Tanah Tropika, 2006
  • Erni Martani, S. Margino, & N. Arfayanti. 2006. Biodegradation of Paraquat in Peat Soil by Micrococcus sp. S2 and Achromobacter sp. SM1. J. Tanah Tropika 12(1) (In press).
  • Natalie, M., Margino, S., Erik, H., Annelieke, P., Geert, V., & Philippe, V. 2009. A 96-well flow cytometric screening assay for detecting in vitro phospholipidosis-induction in the drug discovery phase. Toxicology in Vitro, 23(2), 217-226.
  • Romadhon, R., Subagiyo, S., & Margino, S. 2012. Isolasi dan karakterisasi bakteri asam laktat dari usus udang penghasil bakteriosin sebagai agen antibakteria pada produk-produk hasil perikanan. SAINTEK PERIKANAN: Indonesian Journal of Fisheries Science and Technology, 8(1), 59-64.
  • Yurnaliza, Y., Margino, S., & Sembiring, L. 2012. Kemampuan kitinase Streptomyces RKt5 sebagai antijamur terhadap patogen Fusarium oxysporum. Jurnal Natur Indonesia, 14(1), 42-46.
  • Martani, E., Margino, S., Indradewa, D., & Supriyo, A. 2013. Isolation and Selection of Rhizobium Tolerant to Pesticides and Aluminum from Acid Soils in Indonesia. Journal of Tropical Soils, 16(1), 47-54.
    • read more

    Info Kerja Lapangan

    Uncategorized Senin, 30 September 2019

    DAFTAR NAMA DAN ALAMAT PERUSAHAAN TEMPAT KERJA LAPANGAN

    No. Nama Perusahaan Alamat/Contact Person
    1. PT. SMART Tbk. Plaza BII  Tower  II, 28th – 31st Floor
    Jl. M.H. Thamrin No. 51
    JAKARTA 10350 Indonesia
    2. PT. ASIAN AGRI Jl. Let. Jend Haryono MT No. A-1  MEDAN 20231
    Sumatera Utara, Indonesia
    3. BALAI BESAR TEKNIK KESEHATAN LINGKUNGAN DAN PEMBERANTASAN PENYAKIT MENULAR YOGYAKARTA Jl. Wiyoro Lor, Baturetno, Banguntapan Bantul, Yogyakarta 55197
    Telp. :(62-274) 371 588 Hunting 443 283
    Fax. :(62-274) 563.328
    4. PT PETROKIMIA KAYAKU Jl. Jend. Akhmad Yani
    P.O. Box 107, GRESIK 61101 Indonesia
    Phone :62-031-3981815, 3981831, 3981989
    Fax. : 62-031-3981830, 3981831
    E-mail  : info@petrokayaku.com
    Home Page : http://www.petrokayaku.com
    5. PT. SARI HUSADA Tbk. Jl. Kusumanegara 173 P.O. Box 37 Yogyakarta 55002
    Telp. :(62-274) 512 990
    Fax. :(62-274) 563.328TIRA Building, 3rd floor,
    Jl. H.R. Rasuna Said Kav. B-3 Jakarta 12920
    Telp. :(62-21) 525 6388
    Fax. :(62-21) 522 2423
    6. BALAI BESAR PENGAWAS OBAT DAN MAKANAN Jl. Madukoro, Blok AA-BB No. 8
    Semarang
    7. PT INDAH KIAT PULP AND PAPER Tbk Jl. Raya Serang KM 76, Desa Kragilan Serang 42184
    Banten – Indonesia
    Telp. :(62-254) 280 088 – 281 988 (Hanting)
    Fax. :(62-254) 282 430 – 33
    8. PT. INDOLAKTO Jl. Raya Siliwangi, Cicurug Sukabumi 43359
    Jawa Barat – Indonesia
    P.O. Box 6983/JAT/PK, Jakarta 13069
    Telp. :(62-0266) 732 870
    Fax. :(62-0266) 732 868
    9. PT. INDOFARMA Tbk. Connercial Office:
    Jl. Tambak No. 2 Manggarai, Jakarta 13150
    Telp. :(62-021) 8590 8349
    Fax. :(62-021) 8517 223Head Office and Factory
    Jl. Indofarma No. 1 Cikarang Barat 17530
    Jawa Barat P.O. Box: 4111/Jkt 10041 Indonesia
    Telp. :(62-021) 8832 3971, 8832 3975
    Fax. :(62-021) 8832 3972 / 73
    E-mail : general@indofarmagroup.com
    http : www. Indofarmagroup.com
    10. LEMBAGA ILMU PENGETAHUAN INDONESIA
    (Indonesian Institute of Sciences)
    PUSAT PENELITIAN BIOLOGI
    (Research Center for Biology)    		 Jl. Raya Jakarta – Bogor Km 46 Cibinong 16911
    Indonesia P.O. Box 25 Cibinong
    Telp. :(62-021) 8790 7636, 8790 7604
    Fax. :(62-021) 8790 7612
    11. PT CHEIL JEDANG INDONESIA Head Office and Factory
    Menara Jamsostek 21st Floor Jl. Gatot Subroto Kav.38
    Jakarta 12710 Indonesia
    Telp. :(62-021) 5299 5000
    Fax. :(62-021) 5299 5192 -94Plant
    Desa Arjosari, Kecamatan Rejoso
    Kab. Pasuruan  67181
    P.O. Box 20/PS-Pasuruaan 67101
    Telp. :(62-343) 482 333Fax. :(62-343) 482 768, 482 788
    12. PT EKA TIMUR RAYA PT EKA TIMUR RAYA
    Jl. Raya Nongkojajar Km 1,4, Kec. Purwodadi
    Kab. PASURUAN 67163
    Telp. 62-343-613650,
    Fax 62-343-613651
    13. PT MULTI BINTANG INDONESIA Ratu Plaza Building 24th (Room 1A)
    Jl. Jendral Sudirman Kav. 9, Jakarta 10270
    PO Box 3264 JKT, JAKARTA 10032
    Telp. (021) 720 75112
    Fax.  (021) 720 7861Pabrik :
    JL. Daan Mogot Km. 19
    PO Box 3264 JKT, JAKARTA 10032
    14. PT. Haldin Pacific Semesta Jl. Irian V Block MM-2
    Cibitung Industrial Town MM2100
    Bekasi 17520, INDONESIA
    P : +62 21 89981788
    F : +62 21 89981789
    www.haldin-natural.com
    15. PT Mertina Berto Jl. Pulo Kambing II No 1 Kawasan Industri Pulo Gadung
    JAKARTA
    Telp.  021-4603909
    Fax.  021-4613188
    16. PT Sanghiang Perkasa – Kalbe Nutritional Jl. Raya Bekasi Km. 25, Cakung – Jakarta Timur
    Telp. 021-4600165 (162)
    Fax. 021-4600166
    email : ira.ramadhani@kalbefood.com
    17. PT. Kino Sentra Jl. Semarang-Demak Km. 10 Sayung, Demak
    SEMARANG
    Telp   024 6584920
    Telp   024 6584921
    HP  08156500512
    18. PT. Kievit Indonesia Direktur PT. Kievit Indonesia, JI. Merpati No. I, Mangunsari, Kec. Sidomukti, Kota Salatiga, Jawa Tengah 50721
    19. PT. Foodex Inti Ingredients JL. Jababeka VI BLOK J NO. 4B
    Cikarang Industrial Estate
    Cikarang Bekasi 17530
    Phone : (62) (21) 8934741 – 42 , 8935038
    20. PT Indofood Sukses Makmur Jl. Ancol I No. 4-5 Ancol Barat
    Jakarta
    Telp.  021-6909432
    Fax.  021-6909433
    cahyo_konstituanto@indofood.co.id
    21. PT GREENFIELDS INDONESIA
    UNIT GUNUNG KAWI    		 Desa Babadan
    Kecamatan Ngajum Gunung Kawi, Malang
    Jawa Timur
    22. PT SARI HUSADA UNIT II Jl. Raya  Jogja – Solo Km 19
    Desa Kemudo, Prambanan, Klaten
    23. PT YUMMY FOOD UTAMA HRD PT YUMMY FOOD UTAMA, Jl. Raya Jakarta-Bogor No 40 KM 22 Pasar Rebo, Ciracas Kota Jakarta Timur, DKI Jakarta 13750
    24. PT NEWMONT NUSA TENGGARA Jl. Sriwijaya 258, Mataram
    Lombok, Nusa Tenggara Barat
    25. PT INDAH KIAT Pulp & Papper Jl. Raya Serang Km 76, Kragilan
    Serang, Banten
    26. PT Tirta Investama Ds Polanharjo Delanggu Klaten
    Universitas Gadjah Mada

    Departemen Mikrobiologi Pertanian
    Jl. Flora No. 1 Bulaksumur Yogyakarta
    Telp: +62 274 523065 atau
    +62 274 588688 ext. 33105, 33104, 33110, 31313
    Fax: +62 274 563062
    E-Mail: psmikro.faperta@ugm.ac.id

    © Departemen Mikrobiologi Pertanian 2023

    KEBIJAKAN PRIVASI/PRIVACY POLICY